PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21513.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ARR-B

Protein Properties

Length: 557aa MW: 60741.2 Da PI: 6.158

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21513.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.4	7.8e-24	201	254	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+++LH+ Fv+av+ G ++A Pk+ile+m+v+gL++++v+SHLQkYR Dr21513.1 201 KARVTWSSDLHAVFVRAVNTV-GLDRAGPKRILEVMGVPGLSRQNVASHLQKYRR 254 68*****************.******************************5 PP
2	Myb_DNA-binding	30.1	1.2e-09	203	253	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ +++ +v+av+ G + +k+I + mg g+++ ++ s++qky+ Dr21513.1 203 RVTWSSDLHAVFVRAVNTVGLDraGPKRILEVMGvPGLSRQNVASHLQKYR 253 679***********************************************7 PP
3	Response_reg	68.7	2.6e-23	28	135	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 v+ vdD+ + ++ l+ +l + gy v++++ + al+ll+++ +Dl+++D++mp+mdG++ll++i e ++p+i+++ h++ + ++++++ Ga Dr21513.1 28 VMAVDDDLVCLKFLEILLLHCGY-AVTATQYPCLALNLLRQNSdaYDLVIIDVQMPDMDGFQLLESIVVEM-DIPVIMLSIHSDTKSVTKCIEHGAC 122 789******************.***********888889******************7755.8******************** PP EEEESS--HHHHH CS Response_reg 96 dflsKpfdpeelv 108 d+ +Kp eel Dr21513.1 123 DYMVKPARFEELK 135 ****9999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MVRAIAGSSR RRRRQRNFDS NFPKGMRVMA VDDDLVCLKF LEILLLHCGY AVTATQYPCL 60 ALNLLRQNSD AYDLVIIDVQ MPDMDGFQLL ESIVVEMDIP VIMLSIHSDT KSVTKCIEHG 120 ACDYMVKPAR FEELKLIWKH VVKKSMSETA FEHPSATAAL PLGSGDGSSQ ASGNDHPDQG 180 KGKENELPAN VSDEDSSLVK KARVTWSSDL HAVFVRAVNT VGLDRAGPKR ILEVMGVPGL 240 SRQNVASHLQ KYRRALRLYG RDFFNIVEGD AGAGASGGAD TSGVKAKPQR TMALALTQPV 300 PDNGRLTEDL RVAGFPNNQT AAPVRETPMF SHPMSNQNAL VQTRPSTSLG SQQTIRHISS 360 PSYPALIDLT GRQATLDYRN QQSFISTLDQ INDYIRKTSQ NFLPSSIPPV PTFASGPSTG 420 WTTGFVTDVN SSLAQHGNQQ YQSTAPLVSV IPSKQDVQWG SGAYTKTGPS SGAQNNEATL 480 NVDNHAVAPL HGTSYAESGI YLSEPSIADG TFLFDDDNDG DDLHAMLRQD SKFDVTIGRD 540 ETYEDSLFGY KLTLSIL

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MVRAIAGSSR RRRRQRNFDS NFPKGMRVMA VDDDLVCLKF LEILLLHCGY AVTATQYPCL  60
ALNLLRQNSD AYDLVIIDVQ MPDMDGFQLL ESIVVEMDIP VIMLSIHSDT KSVTKCIEHG  120
ACDYMVKPAR FEELKLIWKH VVKKSMSETA FEHPSATAAL PLGSGDGSSQ ASGNDHPDQG  180
KGKENELPAN VSDEDSSLVK KARVTWSSDL HAVFVRAVNT VGLDRAGPKR ILEVMGVPGL  240
SRQNVASHLQ KYRRALRLYG RDFFNIVEGD AGAGASGGAD TSGVKAKPQR TMALALTQPV  300
PDNGRLTEDL RVAGFPNNQT AAPVRETPMF SHPMSNQNAL VQTRPSTSLG SQQTIRHISS  360
PSYPALIDLT GRQATLDYRN QQSFISTLDQ INDYIRKTSQ NFLPSSIPPV PTFASGPSTG  420
WTTGFVTDVN SSLAQHGNQQ YQSTAPLVSV IPSKQDVQWG SGAYTKTGPS SGAQNNEATL  480
NVDNHAVAPL HGTSYAESGI YLSEPSIADG TFLFDDDNDG DDLHAMLRQD SKFDVTIGRD  540
ETYEDSLFGY KLTLSIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	6e-69	ARR-B family protein

Link Out ? help Back to Top
Ensembl	Dr21513.1