PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr21687.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 210aa    MW: 24347.9 Da    PI: 4.3724
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr21687.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1157.8e-3691301128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                lppGf+F P++eelv ++L +k+++ +++  ++i++vd+++++Pw+L   k+ +++++wyfF+ +++k+     + r+  +gyW    +d+ v+s ++++
  Dr21687.1   9 LPPGFHFFPSEEELVLHFLYNKASHLPCKP-DIIPTVDLHHCDPWQLInGKALEGDNQWYFFTYKAEKA-----EDRVSGDGYWTPVTEDELVFS-GENK 101
                79*************************999.99**************7457778999******999875.....68999****************.999* PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg+kk+Lv+  g+ap+g kt+W+mhey+l
  Dr21687.1 102 VGVKKSLVYCIGEAPEGIKTSWLMHEYHL 130
                ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSKDTKNKLP PGFHFFPSEE ELVLHFLYNK ASHLPCKPDI IPTVDLHHCD PWQLINGKAL  60
EGDNQWYFFT YKAEKAEDRV SGDGYWTPVT EDELVFSGEN KVGVKKSLVY CIGEAPEGIK  120
TSWLMHEYHL LDELVSNPNP NCSRRRSSKK RRHSRMEDKK WVICQVFDTS YGTQDENEME  180
LSCMDEAFLS LNDDDDDDDD DDDDEISFPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-44NAC family protein