PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr22016.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 109aa    MW: 12258.1 Da    PI: 9.575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr22016.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.89.6e-122366148
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
               +gy GVr+++  g ++ eI  p++   +kr++lg+f+t eeA  a++ 
  Dr22016.1 23 TGYLGVRRRP-LGCYATEITNPYT---KKRHWLGTFDTSEEASLAYDM 66
               699*******.8*********865...5******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MDIPDLQCIR LLCHQRRRSR GSTGYLGVRR RPLGCYATEI TNPYTKKRHW LGTFDTSEEA  60
SLAYDMSSIT FSGIDKAQTN FSYMFRIMPS PPPPPPPPSA LPPPPPPLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.16e-22ERF family protein