PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr22212.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 252aa    MW: 28491.7 Da    PI: 8.4674
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr22212.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.54.3e-1070114249
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49 
                +y+GVr+++ +g+++ eIrd +    ++ +r++ g+f t +e a  +++a
  Dr22212.1  70 HYRGVRQRP-WGKFATEIRDsV----MNdARVWWGTFETVKEVAITYDQA 114
                8********.**********44....346*************99999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MCSQPRIELS PLVSDKALSN TSEIGSSKLS MEEIVPDGVA VPEVKIEPVE SELVMEEVLP  60
ATPVLMKGKH YRGVRQRPWG KFATEIRDSV MNDARVWWGT FETVKEVAIT YDQAGSGSGR  120
NDLHHIPLHL LLLLRGHRQQ RFICRSRGKD KASKEMNMGM VLYMGYTYGE WALHWSGASR  180
DGFGVQGQQP RGTVLGCFGK LYHRDLLKMM NPIGKFDVGK FNETGNFGLW QWRVNDLLSQ  240
QGIQEALWET KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.14e-25ERF family protein