PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY31787.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 162aa    MW: 19041.3 Da    PI: 4.4852
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY31787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.34.6e-1761287128
         NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvgl 102
                 ++P d+ l+ + L++k+ ++++e+ + + +++i++++P d+ p+   + +ek +y  ++++  y     ++r +k+gyWk  g  d +++ + g+lv +
  GAY31787.1   6 YNPFDQSLI-KQLNNKIIDEPVEFPD-LITTEINDHHPADFfPEgGDRDREKGCYVLTPKHLLYGLTWLPERRAKNGYWKPYGYiDGRIFGACGKLVAI 102
                 68*******.66*********99966.55669********95542334466799***********999999999********98799************ PP

         NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                 k++++f++  ++ g+ktdW m eyrl
  GAY31787.1 103 KQSFTFHEPGENIGRKTDWNMTEYRL 128
                 ************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
METDPYNPFD QSLIKQLNNK IIDEPVEFPD LITTEINDHH PADFFPEGGD RDREKGCYVL  60
TPKHLLYGLT WLPERRAKNG YWKPYGYIDG RIFGACGKLV AIKQSFTFHE PGENIGRKTD  120
WNMTEYRLLK HSCTSLDSWV LCKIYWESEI IENEDFSDEE EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.24e-15NAC family protein