PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY31923.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 181aa    MW: 20682.9 Da    PI: 9.2748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY31923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-101464655
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                + +E++RRd+++s  ++L +l+P+  +ka++   s  + L +A  YIk+L+
  GAY31923.1 14 KTIEKNRRDHMKSLCFKLSSLIPShHFKASKDMISQQDQLDLASCYIKQLR 64
                689*********************999999999****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MKKRSDQSSK PDRKTIEKNR RDHMKSLCFK LSSLIPSHHF KASKDMISQQ DQLDLASCYI  60
KQLRERVDKL KGMKERAMKS IKPNNINNIM DETNDFCSNL PVVELRDLGS SIEVILISGL  120
QRSFMLYEVI SILEEEGAEV VSASFSTVGD KVFHSVHAQV KISRLGVETS RVCQRLHDLV  180
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-29bHLH family protein