PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32086.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 502aa    MW: 57137.5 Da    PI: 4.5182
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS151.57.7e-471405013374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL +  eav++++ ela+ ++  ls+ asp+g+ ++Rla  +    +    ++++ l+     +e+     ++  aa+k+f++++P+ +f+h++aN+a
  GAY32086.1 140 HLLQAYGEAVEKEQRELADVIIRCLSDKASPAGEILERLAYNL----SPDFEKKGDYLM-----QES----RKNFEAAFKAFYQIFPYGRFAHFAANSA 225
                 8899999********************************9875....555555333333.....333....356778999******************* PP

        GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                 Ile++  + e+vHi+Dfd+++G+QWp++++a+a +     +lR+T v+ ++s+     ++ + eet+++L ++A+ +g++++ + +   ++e+l ++e+
  GAY32086.1 226 ILESIPDDaEHVHIVDFDMGEGIQWPSMIEAMARQ---NRTLRLTSVKIEDSEfarvpRQWSFEETRKQLCDYARDFGLKLKVEEM---DFEEL-VWEM 317
                 *****8877************************86...457*******9888899999999*********************9997...99999.7777 PP

        GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqe.adh..nsesFlerflealeyysalfdsleaklpres.eer 282
                 + k+    +E  + n++++l ++  +s  ++++  e+L++ k++  +   +v++ + + ++   +s+ F   f   le+y a+++s+++++p++   +r
  GAY32086.1 318 KRKKkgcsKEWSVFNCIVELPHMG-RSR-SRKHVIEFLQVAKEMLCRsrgIVTLGDGDaCEKviGSSGFGSFFEGYLEHYQAVLESMKTSFPTQLaGAR 414
                 77777999***************8.333.444479********96544459*****996444579**************************9997799* PP

        GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                 + +E  ++++ i++     g    ++ e+ ++  +    +G+++ ++s+   ++ak l++  +s + ++  +++++++l W++ pLv vSaWr
  GAY32086.1 415 MAMECLFVAPYISS----HGWL--QKWEEIRQGYHLQAGFGLEKCEVSKGFLMEAKELMKGESSYEVTIGgQSKNEIILEWRGTPLVRVSAWR 501
                 ****9988887765....4544..5556788888899999********************999665666678899*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MTQQEFLQPS WPFHTVINST LDDELGTCDF NFDDDTSDYS LTSNLSYLFS NEMTPFPPCD  60
DELQAMMNEF SMELGNFESV FSDKVKDFGT SFDNSEGSLS LLSQVSSPST PTKSSEASMD  120
STVTFLGEDM EIDNQLGVLH LLQAYGEAVE KEQRELADVI IRCLSDKASP AGEILERLAY  180
NLSPDFEKKG DYLMQESRKN FEAAFKAFYQ IFPYGRFAHF AANSAILESI PDDAEHVHIV  240
DFDMGEGIQW PSMIEAMARQ NRTLRLTSVK IEDSEFARVP RQWSFEETRK QLCDYARDFG  300
LKLKVEEMDF EELVWEMKRK KKGCSKEWSV FNCIVELPHM GRSRSRKHVI EFLQVAKEML  360
CRSRGIVTLG DGDACEKVIG SSGFGSFFEG YLEHYQAVLE SMKTSFPTQL AGARMAMECL  420
FVAPYISSHG WLQKWEEIRQ GYHLQAGFGL EKCEVSKGFL MEAKELMKGE SSYEVTIGGQ  480
SKNEIILEWR GTPLVRVSAW RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.16e-21GRAS family protein