PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32389.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 826aa    MW: 90264.9 Da    PI: 6.5063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS413.51.9e-1264508072374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeavs+++le+a+++L ++s+l++p+g++ qR+aayf eA++arl++s+ ++y+alp+ +++  ++++ ++a+++f+ +sP++kfsh+taNq
  GAY32389.1 450 LTLLLQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQT--HTQKMVSAFQVFNGISPFVKFSHFTANQ 546
                 579************************************************************999998..5899999********************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fAe+lg+pfef + va+++ +l++e+L+++++
  GAY32389.1 547 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFAEKLGLPFEFCP-VAEKVGNLDPERLNISKR 640
                 *************************************************....***************************.7***************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 Ea+aV++    h+l+d ++s ++    +L l+++l Pkvv+vveq+++  ++sFl rf+ea++yysalfdsl a++++eseer++vE++ll+rei+nv+
  GAY32389.1 641 EAVAVHWLQ--HSLYDVTGSDTN----TLCLLQRLAPKVVTVVEQDLSP-AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVL 732
                 ********9..999999999999....********************98.899********************************************** PP

        GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 a  g +r  + + +++Wre+l+++GFk ++l  +aa+qa lll +++ dgy++ e++g+l lgWkd  L+++SaWr
  GAY32389.1 733 AVGGPSRSGDVK-FHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 807
                 ******888877.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 826 aa     Download sequence    
MAAACGLRVN NNNNNNNNNN NGCNNNNNNS IISGGGGDDH QSPTIMTSAS NSTSGSNNEG  60
KMVRKRTASE MEVQQQQLYS GSSDYYRSRL PRRNNPINQA PTATPSAIPN YSTMSSFNDN  120
VNMSTLTLPP SSLINNVTSG ASGFLSTATS AATRTTTNFS CIDNLSPHNN HQQPQPPPPA  180
VCGFSGLPLF PPADHHQRNR NAASIGLIPA APSCTSANNL ASSMEDSSAT AWIDGIIKDL  240
IHNSANVSIP QLIHNVREII FPCNPNLAAL LEYRLRSLNS EPLLERSRNK DAALPLHMLQ  300
RANYYINNNN TPQQQQQQQQ GSSGLTLNLD NVSNYSLQDS SFLNWPGLTP LPPHIHEHHP  360
SAVTASLALT QVQPQPQPQP QPQPQPQPQP QELHQQQQED QNENSSPVET MTAATTAPTP  420
PSLAVVNASI REKKEEIRQQ KRDEEGLHLL TLLLQCAEAV SADNLEEANK MLLEISQLST  480
PYGTSAQRVA AYFSEAMSAR LVSSCLGIYA ALPSLPQTHT QKMVSAFQVF NGISPFVKFS  540
HFTANQAIQE AFEREDRVHI IDLDIMQGLQ WPGLFHILAS RPGGPPYVRL TGLGTSMEAL  600
EATGKRLSDF AEKLGLPFEF CPVAEKVGNL DPERLNISKR EAVAVHWLQH SLYDVTGSDT  660
NTLCLLQRLA PKVVTVVEQD LSPAGSFLGR FVEAIHYYSA LFDSLGASYG EESEERHVVE  720
QQLLSREIRN VLAVGGPSRS GDVKFHNWRE KLQRSGFKGI SLAGNAATQA TLLLGMFPCD  780
GYTLVEDNGT LKLGWKDLCL LTASAWRPLI HHPCNNINAI STRYSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein