PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32430.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 243aa    MW: 27236.7 Da    PI: 5.8254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.8e-1666115255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++GVr +  +++Wv+e+r+p   +k++r++lg++ ++e+Aa+a++ a+++l+g
  GAY32430.1  66 IFRGVRMRN-NNKWVCELREP---NKQTRIWLGTYPSPEMAARAHDVAALALRG 115
                 59****999.8*********8...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDILFGQVSD PGLTDNKPES STQSDASSTA PPRRGAHSDE EVLLLATSRP KKRAGRRVFK  60
ETRHPIFRGV RMRNNNKWVC ELREPNKQTR IWLGTYPSPE MAARAHDVAA LALRGKSACL  120
NFADSVWRLP VPASTDAKDI RKAAAEAAEA FRPRDDELEE SNIHHVKLEE VQKTMQENTL  180
LPENVLYMDE HAVFDMPGLL ADMAEGLLLS PPPLHFGDDD VMKWDYHNNG ESDGCVSLWS  240
HSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.11e-59ERF family protein