PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32494.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 424aa    MW: 46660.2 Da    PI: 4.9841
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.39.4e-116624213374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  lLl+cAe+v+ ++l  a+ lL ++sel+sp  ++ +R+ ayf+ AL+ar+++s+ ++y+ l++++ + ++s++ ++al+ ++ ++P++kfsh+taNqa
  GAY32494.1  62 GLLLQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQA 160
                 58************************************************************************************************* PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                 I +a++g+++vHiiD+di+qGlQWp L++ L sR+++  s+RiTg+gs    s+e le+tg+rLa+fA +lg+pf+fn+l  k  + +++++L v+pgE
  GAY32494.1 161 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGS----SSELLESTGRRLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGE 255
                 ************************************************....9**************************999999999*********** PP

        GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                 +++V++++  h l+d ++s       +L+++  l+Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l+++s er++vE++l+g ei+n+va
  GAY32494.1 256 TIVVHWMH--HCLYDITGSDLG----TLRMLTLLRPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVA 347
                 ******99..777777777777....**********************.789*********************************************** PP

        GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   g +r+ + + +e+W e l+++GF+pv+ls + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  GAY32494.1 348 VGGPKRTGEVK-VERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 421
                 *****998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MKSKRVDRDD DDDNPNGDPS RAVAKRANVI EQEQKLQEQE EEAEQHDVVV MEGESAGLRL  60
LGLLLQCAEC VAMDNLDDAT DLLPEISELS SPFVSSPERV GAYFAHALQA RVVSSCLGTY  120
SPLTTKSLTL SQSQKIFNAL QSYNSICPLI KFSHFTANQA IFQALDGADC VHIIDLDIMQ  180
GLQWPGLFHI LVSRSKKIRS MRITGFGSSS ELLESTGRRL ADFAMSLGLP FDFNPLEGKI  240
GNIIDVSQLG VRPGETIVVH WMHHCLYDIT GSDLGTLRML TLLRPKLITI VEQDLSHGGS  300
FLGRFVEALH YYSALFDALG DGLGADSIER HTVEQQLFGC EIRNIVAVGG PKRTGEVKVE  360
RWGEELKRVG FRPVSLSGNP AAQASLLLGM FPWKGYTLVE ENGCLKLGWK DLSLLTASAW  420
QPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein