PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32586.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 393aa MW: 44982.9 Da PI: 6.448

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.3	1.9e-15	290	373	1	90
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k +++s+v+ +l l++kf++++ + +++++++ledesg +++ k+ ++k + l++GW++F a++L egD +vF+l+ s+f GAY32586.1 290 FIKFMLRSHVTGGFWLGLSRKFCTDNL-P-KQDTMIVLEDESGSEYDTKYLVEKIG----LSAGWRGFSIAHKLVEGDALVFHLVTPSKF 373 89*******************9995.3.37789***********555555....*********************9876666 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
PMDDELEVAP KDHSEKRVKK NKRAKRVKPP PGFHRDNNQN NSLMLLETNN GHVEDQFNND 60 TEDLGPNKVL PHSESSNFKE MKSIDDFTIL VDGLAIDHEL SDQHRNKYYD LCCSQNSFLH 120 DHLLKSINCK LAAEIITQTV NIAEAIRACN LSTSRADYEI WDKTLKGFEL LGMNVGFLRA 180 RLNRLMSLAF ESEESEVSKR LREVSAEQAR AEEEMRSLEL KLLRLKETMG RLDSEVESLK 240 VTCNEPRNPK CEKRKRSTYD NLYDNEEVKN AVMKQANDIQ ANLDPQFPSF IKFMLRSHVT 300 GGFWLGLSRK FCTDNLPKQD TMIVLEDESG SEYDTKYLVE KIGLSAGWRG FSIAHKLVEG 360 DALVFHLVTP SKFKSLYSEA GRSDRMESKR SGL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

PMDDELEVAP KDHSEKRVKK NKRAKRVKPP PGFHRDNNQN NSLMLLETNN GHVEDQFNND  60
TEDLGPNKVL PHSESSNFKE MKSIDDFTIL VDGLAIDHEL SDQHRNKYYD LCCSQNSFLH  120
DHLLKSINCK LAAEIITQTV NIAEAIRACN LSTSRADYEI WDKTLKGFEL LGMNVGFLRA  180
RLNRLMSLAF ESEESEVSKR LREVSAEQAR AEEEMRSLEL KLLRLKETMG RLDSEVESLK  240
VTCNEPRNPK CEKRKRSTYD NLYDNEEVKN AVMKQANDIQ ANLDPQFPSF IKFMLRSHVT  300
GGFWLGLSRK FCTDNLPKQD TMIVLEDESG SEYDTKYLVE KIGLSAGWRG FSIAHKLVEG  360
DALVFHLVTP SKFKSLYSEA GRSDRMESKR SGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	4e-37	B3 family protein