PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32635.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 129aa    MW: 14523 Da    PI: 11.0439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.8e-1330951585
                -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE- CS
          B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld 85
                + ++p + a+++       ++   ede+g++W ++l++rk++ +  v ++GW++Fv+++gLk  D v F   
  GAY32635.1 30 LASFPPSGAQKY------FQDFNAEDEKGKKWLFRLRIRKGKHKkPVTSAGWRRFVRQKGLKIHDKVSFFTG 95
                223344444333......347999************9966665569********************999743 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MGGTNEKLLF SKTLTKTDIN NKFSVKCKSL ASFPPSGAQK YFQDFNAEDE KGKKWLFRLR  60
IRKGKHKKPV TSAGWRRFVR QKGLKIHDKV SFFTGHNEAE IATGVKYKIK VQKAVIVLKA  120
VLGHAPCSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.12e-08ARF family protein