PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY32825.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family YABBY
Protein Properties Length: 215aa    MW: 23974.2 Da    PI: 8.1634
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY32825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY227.53.6e-70131782170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                 d f +seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++      a + hl++++  + ++  + e  n + n   +++++++  +  
  GAY32825.1  13 DQFPTSEQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHLGHNFFSPSHNL-REEIPNPSPNFLINQTNTNDFIVP- 109
                 56889*****************************************999999999999999999998875543.333333333333333333333332. PP

       YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  ++   +e+pr+p + rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+ihfgl
  GAY32825.1 110 -TRGVVDELPRPPATSRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 178
                 .3567889************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSMSSSSTTL SLDQFPTSEQ LCYVHCNLCD TVLAVSVPCT SLFKTVTVRC GHCTNLLPVN  60
MRGLLLPSAN QFHLGHNFFS PSHNLREEIP NPSPNFLINQ TNTNDFIVPT RGVVDELPRP  120
PATSRPPEKR QRVPSAYNRF IKDEIQRIKA GNPDITHREA FSAAAKNWAH FPHIHFGLVP  180
DHQPVKKANV RQQEGEDVLM KDGFFASANV GVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-86YABBY family protein