PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32891.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YA

Protein Properties

Length: 317aa MW: 34669 Da PI: 9.4625

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	96.1	3.9e-30	150	206	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RR++Rak+ e+k+ +++rkpy+h+SRh hA+rRpRg+gGrF GAY32891.1 150 DGPIYVNAKQYHGIIRRRKSRAKAVLENKI-TRKRKPYMHHSRHLHAMRRPRGCGGRF 206 57**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MAMQTVYFKE HHEGNGHNQN GQLSSVHSSA PWWSSLGSQS VYGASCGQLK PLSMETSTEE 60 AGQTLDKPNT THFSFFPGDV KSSGDGQKLP PAISLQSALP ENPGCFELGF GQPMICAKYP 120 YADQYYGVFS AYGAQISGRI MLPLNLATDD GPIYVNAKQY HGIIRRRKSR AKAVLENKIT 180 RKRKPYMHHS RHLHAMRRPR GCGGRFLNTK TRDGSGRTEE KKTCIQQLLQ PTGSQSSEVL 240 QSESGTLSSP KETNGSGPNL SGSEVTSMYS RGEFGHFRIN HLGPPVHSFS GIMDTGRGIV 300 MPSQWVAAAD NCCNLKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	184	RRRKSRAKAVLENKITRKRK
2	165	185	RRRKSRAKAVLENKITRKRKP
3	166	185	RRRKSRAKAVLENKITRKRK
4	166	186	RRRKSRAKAVLENKITRKRKP
5	167	187	RRRKSRAKAVLENKITRKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	8e-72	NF-YA family protein