PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33021.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 369aa MW: 41649.4 Da PI: 6.9866

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	101.4	5.1e-32	125	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ltpsdv+k++rlv+pk++ae++ ++++ ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+++F++++++ GAY33021.1 125 FEKPLTPSDVGKLNRLVIPKQHAEKYfplggggadlgSSSSDKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTD 223 99***************************999998555558889********************************************98889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+++++r+ GAY33021.1 224 SERLFIGWRRR 234 999****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MSINHFSTDL QETPWWQQHP QQLQQSMMET TQNSSNNSSS SATDPQQQQQ QLSSWSSPHH 60 HQFYHHHQQH QHHLWLDSYN NNNNNSHHNP TLSFNLNSQH DATEAQPMTN LNSNQEQELE 120 KEPMFEKPLT PSDVGKLNRL VIPKQHAEKY FPLGGGGADL GSSSSDKGLL LSFEDESGKC 180 WRFRYSYWNS SQSYVLTKGW SRYVKEKRLD AGDVILFERH RTDSERLFIG WRRRGATSVA 240 QVAQAGGAAA GGCGWPRGLY PNHPYPVDVA HGHGVSVPLY QHAGSGVQSQ TTSVGNSRTL 300 RLFGVNLECQ VDDKSEGSES QAEAHGHQQF NYSVEAYDSN STNRHNHVVG QFNCLCYRHG 360 VIANKIMSN

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MSINHFSTDL QETPWWQQHP QQLQQSMMET TQNSSNNSSS SATDPQQQQQ QLSSWSSPHH  60
HQFYHHHQQH QHHLWLDSYN NNNNNSHHNP TLSFNLNSQH DATEAQPMTN LNSNQEQELE  120
KEPMFEKPLT PSDVGKLNRL VIPKQHAEKY FPLGGGGADL GSSSSDKGLL LSFEDESGKC  180
WRFRYSYWNS SQSYVLTKGW SRYVKEKRLD AGDVILFERH RTDSERLFIG WRRRGATSVA  240
QVAQAGGAAA GGCGWPRGLY PNHPYPVDVA HGHGVSVPLY QHAGSGVQSQ TTSVGNSRTL  300
RLFGVNLECQ VDDKSEGSES QAEAHGHQQF NYSVEAYDSN STNRHNHVVG QFNCLCYRHG  360
VIANKIMSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	2e-63	B3 family protein