PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33049.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Whirly
Protein Properties Length: 83aa    MW: 9431.57 Da    PI: 7.3647
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly25.22.8e-081441110137
      Whirly 110 svtnslvkgnesfsvPvskaefavlrsl 137
                 +v n+++k+ne+f+vPv+ aefav++++
  GAY33049.1  14 NVANNILKTNERFVVPVTTAEFAVMKTA 41 
                 58999*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MATTSRRPDN EDRNVANNIL KTNERFVVPV TTAEFAVMKT ACSFALPHLM GWDRLTNQLP  60
RSSTESSSSS KVDQQFLNLE WDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.11e-20Whirly family protein