PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33107.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GeBP
Protein Properties Length: 239aa    MW: 26964.6 Da    PI: 10.4048
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.32.9e-1524121498
      DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddi........dafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                  r+++++Dei lL+ + + ++++ +s+s+ +        +  ++ +++s+ +k+++ q+++KirrL+ K++k+ +      +  ++++hdq  f++++ 
  GAY33107.1  24 GRVFTDSDEIRLLKIFKKLAEQNRSSSSSSTpnstitldSSSFNRINSSLGSKFTHAQITDKIRRLRVKYHKQARS-----KSLVKTPHDQALFKIAQL 117
                 59**************999887777433322111112222457899*************************99998.....67899************* PP

      DUF573  95 iWgs 98 
                 iWg+
  GAY33107.1 118 IWGK 121
                 **95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSSTPRKRKQ VATSPVSSPT SQNGRVFTDS DEIRLLKIFK KLAEQNRSSS SSSTPNSTIT  60
LDSSSFNRIN SSLGSKFTHA QITDKIRRLR VKYHKQARSK SLVKTPHDQA LFKIAQLIWG  120
KKKTNRKKEA KKVQNSASAD DEDEGEEQKN EQNEEREREG AELDEYPVLA GELSKYLPMN  180
LVWREALKSL GNDKLKEMND KWMLIGIEEA KIVSKKADLV KEQTQLIMKA LGDGTANGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.15e-10GeBP family protein