PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33211.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 190aa    MW: 22092.4 Da    PI: 8.8315
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.64.5e-085279126
                --S---SGGGGTS..--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartG..tCkyGdrCkFaHg 26
                +k ++C  ++++   tC++G  C+F+H+
  GAY33211.1 52 WKIAICGEYMKSRlkTCSRGMACNFIHC 79
                7889***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTVCRNGSSH LRGSVYVHYK SLESAILAYH SVNGCYFTGK QITCEFINVT RWKIAICGEY  60
MKSRLKTCSR GMACNFIHCF RNPSGDYEWA DWDKPPPRYW VKKMAALFGY SDESGTWNQE  120
RSDSTNADRH HYKRSRSREA DRVKSGSGIS QDDERQVHKT TWSRRRSNYH SESRSDEANS  180
DGSWSDMDRD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133138KRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.13e-68C3H family protein