PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33260.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 210aa    MW: 22291.8 Da    PI: 4.9129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-183382255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr+++ +g+Wv+eIr+p     r  +r++lg+f t+e+Aa a++ a+++l+g
  GAY33260.1 33 TYRGVRRRS-SGKWVSEIREP-----RkpTRIWLGTFATPEMAAIAYDVAALALKG 82
                69****888.8*********9.....448************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MHYSKSNKST NPSSSSGSGS GTNASAGPGR HPTYRGVRRR SSGKWVSEIR EPRKPTRIWL  60
GTFATPEMAA IAYDVAALAL KGQEAELNFP NSAASLPVPA STSPRDIQAA AASAAAALGA  120
AKDALSGETI AESGDHHQAP RNDSVMIEPA ERPMVLQEFM DEELIFDMPN LLVNMAEGML  180
LSPPRLDIAG DAADDDDHGV GDEHNLWKFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.18e-43ERF family protein