PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33264.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

DBB

Protein Properties

Length: 210aa MW: 22583.9 Da PI: 4.9022

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.9	7.3e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e++ C ++ lC +C ++ H H++v+l GAY33264.1 4 QCEVCEKAEAEVLCCADEAVLCSNCDVKVHTAnklsrkHQRVSL 47 7*****************************55788889998875 PP
2	zf-B_box	28.2	3.8e-09	67	108	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ ++e + +fC +++ lC++C +++H H GAY33264.1 67 QLPSCEICQERNGYFFCLEDRAILCRQCDVSIHMAspfqssH 108 7899****99*******************444555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MKLQCEVCEK AEAEVLCCAD EAVLCSNCDV KVHTANKLSR KHQRVSLLKH NAAAASSSSS 60 SSPSASQLPS CEICQERNGY FFCLEDRAIL CRQCDVSIHM ASPFQSSHQR FLIGGIKVAL 120 ESAADNNSRT SESTGCEGRE FSNTAYFPTA AAEESRQAMT MDSSTGSGSG LAAAHLATAA 180 SSCSWQLDDL LGNDDFNYHD FSDTESSRIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	8e-46	DBB family protein