PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33279.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 255aa    MW: 27702.8 Da    PI: 4.4015
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.55.6e-06228251123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 ++C+ C++sF++   L++H +  H
  GAY33279.1 228 FPCKSCNRSFTTEGGLQSHTKAkH 251
                 89*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MFLASLTALC FVPTTDDDDN SDSDEDKMDI RLVSNGKPEL QAKPLSEKPI AVEPSASTAK  60
QNKKDVKPKL KADGSDSDDS DLNTSSSDDD ETSDDENPNL VNRDGSSDES SGELDESDDD  120
EDDEGTDESE SDDEDEETPK KFYYVTPQTA STNCCWFLKA ESSKKRPVES ASKTYVPDKK  180
AKFVTPQKTE EKKGVSHIAT PHPSKKSAKT PANNDQTKQQ PHKSGGSFPC KSCNRSFTTE  240
GGLQSHTKAK HGAPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.13e-22C2H2 family protein