PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33348.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 231aa MW: 26662.2 Da PI: 8.7471

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl GAY33348.1 14 KGPWTPEEDQILISFIQRFGHGNWRALPKQAGLMRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.7	1.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e ++++++ lG++ W+tIa++++ gRt++++k++w+++l GAY33348.1 67 RGNFSKDEEETILKLHRVLGNR-WSTIAARLP-GRTDNEIKNYWHSHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVRTPCCEKM GSKKGPWTPE EDQILISFIQ RFGHGNWRAL PKQAGLMRCG KSCRLRWINY 60 LRPDIKRGNF SKDEEETILK LHRVLGNRWS TIAARLPGRT DNEIKNYWHS HLKKRLKQNL 120 ISPKQQCDIV QALIHSDHNS NATIHKPVCN STHQGIQNHP QDTPNFPPKS CNESTDIASE 180 NLPGIEGKYE TRDFAAMEKM NYENCSNVME FWYNILMNSG NSIEMQENSG H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	5e-71	MYB family protein