PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33372.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 498aa MW: 54738 Da PI: 7.0333

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ GAY33372.1 62 RERWTEEEHKKFLEALKLFGRA-WRKIEEHVG-TKTAVQIRSHAQKF 106 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MNMAVQDECG GNHSNSVFSA GNGIESSSGL HTVTGLEVKD QFSCGNDFAP KPRKPYTITK 60 QRERWTEEEH KKFLEALKLF GRAWRKIEEH VGTKTAVQIR SHAQKFFSKV VRESNGCSTS 120 PVEPVEIPPP RPKRKPMHPY PRKLAHPPVK ESLNPELSRT SLSPILSVSE RENQSPTSVM 180 FAMGSDAFGS SDSNSPNGSL SPVSSAVPEQ LGGLTLSHPS SSPEERGSPS SGPVTPGSVT 240 DEQSPKCVLK MGLSPQGFDK EVSDVRASSR TLKLFGTIVL VTDSQRLSSP TAGTCKLFES 300 FPSEALEGKP LQLLPLEVMH TESLSEDTKY AWRRTLPHGG SGAFSCMQSP DDDSNMVDTG 360 SGAHLPWWNF SHGLPYAVTP NNQQVQNLRL HSSVKEVQGR EFKKEGSLTG SNSKSVNEED 420 SIDKSSDVDS QSRRQSLDKE DEWPEVAFEL KPSENSAFSV IRTSTDKHMK GFVPYKKRIV 480 ERDNQLSAVG NGRDQREW

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MNMAVQDECG GNHSNSVFSA GNGIESSSGL HTVTGLEVKD QFSCGNDFAP KPRKPYTITK  60
QRERWTEEEH KKFLEALKLF GRAWRKIEEH VGTKTAVQIR SHAQKFFSKV VRESNGCSTS  120
PVEPVEIPPP RPKRKPMHPY PRKLAHPPVK ESLNPELSRT SLSPILSVSE RENQSPTSVM  180
FAMGSDAFGS SDSNSPNGSL SPVSSAVPEQ LGGLTLSHPS SSPEERGSPS SGPVTPGSVT  240
DEQSPKCVLK MGLSPQGFDK EVSDVRASSR TLKLFGTIVL VTDSQRLSSP TAGTCKLFES  300
FPSEALEGKP LQLLPLEVMH TESLSEDTKY AWRRTLPHGG SGAFSCMQSP DDDSNMVDTG  360
SGAHLPWWNF SHGLPYAVTP NNQQVQNLRL HSSVKEVQGR EFKKEGSLTG SNSKSVNEED  420
SIDKSSDVDS QSRRQSLDKE DEWPEVAFEL KPSENSAFSV IRTSTDKHMK GFVPYKKRIV  480
ERDNQLSAVG NGRDQREW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-53	MYB_related family protein