PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33439.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 110aa    MW: 12550.2 Da    PI: 4.8664
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.22.5e-178106193
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                 lp G++F+P+de lv++yL +k+++++ ++ +  +++ ++y + ePw++ +++ +    + +++yfF++ +kk+ +g+r  r + +g+W+     k+v+
  GAY33439.1   8 LPLGCKFQPSDELLVQFYLFNKISETPAPFVDDlVRTENLYGSkEPWQIWRQFGGpdleDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVC 106
                 699************************887665488889997669****754433334356789**************************888777775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MERTRPPLPL GCKFQPSDEL LVQFYLFNKI SETPAPFVDD LVRTENLYGS KEPWQIWRQF  60
GGPDLEDGED LYFFTPLKKK SVNGSRIDRR VGTGTWQGED AGKAVCVPQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.16e-13NAC family protein