PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33866.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 60aa    MW: 6780.91 Da    PI: 10.481
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.52.3e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr gi+KKAeELSvLCda+va+iifs tgkl+eyss
  GAY33866.1  9 KKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS 59
                78***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    
MAREKIQIKK IDNATARQVT FSKRRRGIFK KAEELSVLCD ADVALIIFSA TGKLFEYSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-35MIKC_MADS family protein