PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY33942.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 126aa MW: 15098 Da PI: 10.0072

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY33942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31	6e-10	14	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l ++ ++G +W+ ++ +++k+c++rw +yl GAY33942.1 14 RGAWSKEEDDKLRAYILRYGHWNWTQ----LP--KSGKSCRLRWMNYL 55 89****************777777....99..89********97 PP
2	Myb_DNA-binding	51.6	2.2e-16	62	106	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T+eE++ +++ +q+G++ W++Ia++++ gRt++++k++w+++l GAY33942.1 62 GNYTKEEEDTIIKTRQQHGNK-WALIAAKLP-GRTDNEIKNYWHTHL 106 789****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence
MVRAPTYDEK GMKRGAWSKE EDDKLRAYIL RYGHWNWTQL PKSGKSCRLR WMNYLRPDIK 60 HGNYTKEEED TIIKTRQQHG NKWALIAAKL PGRTDNEIKN YWHTHLKKKI DKKTDSADQE 120 HEETSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-51	MYB family protein