PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33955.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YA
Protein Properties Length: 244aa    MW: 27230.7 Da    PI: 9.5511
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA93.72.2e-29143205158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksr......kpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++Il+RRq+Rak+e+e+k+  ksr      +pylheSRh hAlrR+Rg+gGrF
  GAY33955.1 143 EEPVFVNAKQYHGILRRRQSRAKAESENKV-LKSRkacyklQPYLHESRHLHALRRARGCGGRF 205
                 69***************************8.444413333369********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSLKLFATSL TSILLVVLPD LSCRFYMRDG LMTSSVHDMS DNSDADEQRK HPESQLQSST  60
PAMGMSHPSI TTPNVQYATH QVGAGHAMAP AAYPYPDPYY RSIFAPYDAQ PYPPQPYGGQ  120
PMVHLQLMGI QQAGVPLPTD AVEEPVFVNA KQYHGILRRR QSRAKAESEN KVLKSRKACY  180
KLQPYLHESR HLHALRRARG CGGRFLNSKK NQNQQKGMAS DDKSQSNLNL NSDKNEIASS  240
DRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-54NF-YA family protein