PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33956.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YA
Protein Properties Length: 199aa    MW: 22167.5 Da    PI: 8.4342
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA52.22e-16143178137
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 
                 +ep++VNaKQy++Il+RRq+Rak+e+e+k+  ksrk 
  GAY33956.1 143 EEPVFVNAKQYHGILRRRQSRAKAESENKV-LKSRKA 178
                 69****************************.777774 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MSLKLFATSL TSILLVVLPD LSCRFYMRDG LMTSSVHDMS DNSDADEQRK HPESQLQSST  60
PAMGMSHPSI TTPNVQYATH QVGAGHAMAP AAYPYPDPYY RSIFAPYDAQ PYPPQPYGGQ  120
PMVHLQLMGI QQAGVPLPTD AVEEPVFVNA KQYHGILRRR QSRAKAESEN KVLKSRKACY  180
KLQVLCPLFG LVFYLIGMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-32NF-YA family protein