PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34247.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 235aa    MW: 25755.3 Da    PI: 7.2963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-0979125554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRdr+N++f eL ++l +    + +K++K   L  Av+ + +L
  GAY34247.1  79 KACREKMRRDRLNDRFMELASILDPG---RPPKMDKTVLLADAVQMVTQL 125
                 678**********************8...88**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSSPYNSNWI FDCGLLDGIG VSGGDLPSLD PPEVLWSSST SNPPLSAEFD DSFGNLDAFK  60
ETGSRKRVRS GSCSASGSKA CREKMRRDRL NDRFMELASI LDPGRPPKMD KTVLLADAVQ  120
MVTQLRDEAQ KLKVSNENLL GKINELKCEK NELRDEKQRL KNEKENLERQ VKALSSQPAF  180
LPHPPPVPAP FSAPGQVVGG KLVPLVGYPG VSMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-74bHLH family protein