PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34254.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GeBP

Protein Properties

Length: 393aa MW: 43554.6 Da PI: 5.1885

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	128.3	3.3e-40	163	259	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 lfqrlwse+Deiv+L+G+id+ +k+g +p +d+++fy+++k+s++++vsk qlv+KirrLKkKf+++ k +k+g++ +fsk+h+qk+++lsk++Wg GAY34254.1 163 LFQRLWSEDDEIVVLKGMIDYSTKKGLDPNQDMQGFYDYIKNSLHVDVSKAQLVDKIRRLKKKFENNLGKgKKKGEDRTFSKPHEQKAYDLSKQFWG 259 79*****************************************************************98899********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MAPKKPNPME EPPAASSSEE VEEDGDSSGS EEVSSSDGDG EEDAQEPAKT QSPPPQKTHK 60 QSAVKKPEAT PATPQTKSLS SGESESESES ESEPDATPKP IATKPMEETP KVTKPRSKPL 120 SSKRPNETEE SAKDSKRAKK KSPEADPDEE EQKKPGEDTK KQLFQRLWSE DDEIVVLKGM 180 IDYSTKKGLD PNQDMQGFYD YIKNSLHVDV SKAQLVDKIR RLKKKFENNL GKGKKKGEDR 240 TFSKPHEQKA YDLSKQFWGG ESTGGVIESA AKSNGKPKKN QNQKGNSKSL AALKAELTDG 300 AEGDKMEVDN DKRNAVNKTV NLKDKDKVLF DKSLGVAGLE EFVLRDGLDM IEGAKKAELE 360 ERWKELQVAQ LELFLQRNEL IKEQAKLILE AMK

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MAPKKPNPME EPPAASSSEE VEEDGDSSGS EEVSSSDGDG EEDAQEPAKT QSPPPQKTHK  60
QSAVKKPEAT PATPQTKSLS SGESESESES ESEPDATPKP IATKPMEETP KVTKPRSKPL  120
SSKRPNETEE SAKDSKRAKK KSPEADPDEE EQKKPGEDTK KQLFQRLWSE DDEIVVLKGM  180
IDYSTKKGLD PNQDMQGFYD YIKNSLHVDV SKAQLVDKIR RLKKKFENNL GKGKKKGEDR  240
TFSKPHEQKA YDLSKQFWGG ESTGGVIESA AKSNGKPKKN QNQKGNSKSL AALKAELTDG  300
AEGDKMEVDN DKRNAVNKTV NLKDKDKVLF DKSLGVAGLE EFVLRDGLDM IEGAKKAELE  360
ERWKELQVAQ LELFLQRNEL IKEQAKLILE AMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-26	GeBP family protein