PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34280.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 199aa    MW: 23049.5 Da    PI: 9.127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000133471755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +ErrRR+++ +++ +Lr+l+            Ka+i+e A+ YI +Lq
  GAY34280.1 34 TAERRRREKLSNRLLTLRSLMN-----------KATIVEDAITYIEKLQ 71
                68*****************975...........559***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEFLGSAFTQ SCITQKRGRR VYGDDRDFKS KNLTAERRRR EKLSNRLLTL RSLMNKATIV  60
EDAITYIEKL QMTVKVLSDQ LLEMESSSEE SERPRNDEIN AAEEMKKHGI EEKVEVTNVD  120
GCKLWIRIIF EKKRSRITKF LEAMASHGFE LSDTNVTTFK GATLISSCLN FFFSKKGVYS  180
YKIEAEQVKE LLQEIIKSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13641ERRRRE
23742RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-34bHLH family protein