PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34335.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 72aa    MW: 8088.38 Da    PI: 9.9505
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.8e-072391355
                HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                Rd++++++ +Lr l+P+      +K++Ka i+  +v Y+++Lq
  GAY34335.1  2 RDKMKKRLYQLRALVPNI-----TKMDKALIVGDVVSYVQELQ 39
                9****************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MRDKMKKRLY QLRALVPNIT KMDKALIVGD VVSYVQELQM KAKNLKTEVA GCEASPSSSE  60
NSKESIENTK NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.19e-19bHLH family protein