PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34370.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 885aa MW: 97501.6 Da PI: 7.7788

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.1	3.7e-14	345	426	1	79
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDf 79 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G + +L++gD+ GAY34370.1 345 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDSKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDI 426 89************************555566778***********99899999999.**************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 885 aa Download sequence
MSSSSKICFN KECKELKSER PRKGWLLRGG EFAELCDRCG SIYEEGRFCD TFHVNASGWR 60 CCESCGKRVH CGCITSVHAF TLLDAGGIEC MTCARKNVLV APTPSWPPSL FYQTPFPERI 120 KDLSVKNWTQ LAGSGPVPWR QAPSLFNSSI PQPELRPRLP YEVDLSAGID RINASERLSV 180 PSLEKRKLED FSERLMNGGL KSGSRDIPEN ANAGWNQFRA SRSNCDMQPS SCLNKPQQSS 240 TLKDDSSTPH FGLAVSYASP SETNSQIGVS GSHLRPVVQP PLVKQFHGNL PNGADSLGET 300 QVRNGRPRVD ARGRSQLLPR YWPRFTDQDL QQISGDSNSV ITPLFEKMLS ASDAGRIGRL 360 VLPKKCAEAY FPPISQPEGL PLKVQDSKGK EWIFQFRFWP NNNSRMYVLE GVTPCIQNMQ 420 LQAGDIGNQS KSQESYEMFS FMWKDNEANK AGTGIPANGH AELADPSSWS KVDKSGYIAT 480 EALGAKSSIS RKRKNTTLGS KSKRLKIENE DVIELKLTWE EAQGLLRPPP NNVPSVVVIE 540 GYEFEEYEDA PILGKPTIFA TDNVGEKIQW VQCEDCSKWR KVPANARLPS KWTCSGNLWD 600 PERSVCSAAQ ELREEQLEDL IAPNNPASSK KLKAAKREPD CVEALEGLDT LANLAILGEG 660 EGLTASSQAT TKHPRHRPGC SCIVCIQPPS GKGPKHKQTC TCNVCLTVKR RFHTLMLRRE 720 KKQSEKDAET SRKKQQQQKL PVPEKSADDD PLSCSKTGNN SPNEKKVVSE GSDDDSSRIK 780 SSTSPFKGQI DLNIQPEREE ELSPGSDSGS MIRLLQDATE KYLRQQRLSS SGVNTSSVEN 840 EGLQGGVTGE KISNGITLDG SHQDTDEDHH GSLSVKASAS ISATG

Sequence ? help Back to Top

Protein Sequence Length: 885 aa Download sequence

MSSSSKICFN KECKELKSER PRKGWLLRGG EFAELCDRCG SIYEEGRFCD TFHVNASGWR  60
CCESCGKRVH CGCITSVHAF TLLDAGGIEC MTCARKNVLV APTPSWPPSL FYQTPFPERI  120
KDLSVKNWTQ LAGSGPVPWR QAPSLFNSSI PQPELRPRLP YEVDLSAGID RINASERLSV  180
PSLEKRKLED FSERLMNGGL KSGSRDIPEN ANAGWNQFRA SRSNCDMQPS SCLNKPQQSS  240
TLKDDSSTPH FGLAVSYASP SETNSQIGVS GSHLRPVVQP PLVKQFHGNL PNGADSLGET  300
QVRNGRPRVD ARGRSQLLPR YWPRFTDQDL QQISGDSNSV ITPLFEKMLS ASDAGRIGRL  360
VLPKKCAEAY FPPISQPEGL PLKVQDSKGK EWIFQFRFWP NNNSRMYVLE GVTPCIQNMQ  420
LQAGDIGNQS KSQESYEMFS FMWKDNEANK AGTGIPANGH AELADPSSWS KVDKSGYIAT  480
EALGAKSSIS RKRKNTTLGS KSKRLKIENE DVIELKLTWE EAQGLLRPPP NNVPSVVVIE  540
GYEFEEYEDA PILGKPTIFA TDNVGEKIQW VQCEDCSKWR KVPANARLPS KWTCSGNLWD  600
PERSVCSAAQ ELREEQLEDL IAPNNPASSK KLKAAKREPD CVEALEGLDT LANLAILGEG  660
EGLTASSQAT TKHPRHRPGC SCIVCIQPPS GKGPKHKQTC TCNVCLTVKR RFHTLMLRRE  720
KKQSEKDAET SRKKQQQQKL PVPEKSADDD PLSCSKTGNN SPNEKKVVSE GSDDDSSRIK  780
SSTSPFKGQI DLNIQPEREE ELSPGSDSGS MIRLLQDATE KYLRQQRLSS SGVNTSSVEN  840
EGLQGGVTGE KISNGITLDG SHQDTDEDHH GSLSVKASAS ISATG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	492	506	KRKNTTLGSKSKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-165	B3 family protein