PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34437.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 311aa    MW: 33982.9 Da    PI: 9.3835
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof115.42.3e-3648105259
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                 + + lkcprCdstntkfCyynny+ sqPr+fCkaC+r+WtkGG+lrnvP+Gggr+ ++
  GAY34437.1  48 QAEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCKACKRHWTKGGTLRNVPIGGGRKSKR 105
                 56789************************************************87766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MGLSSKQVSS DGQGWSQSLL QAQTLELPKP ASVKRPLQQQ SSLNQQQQAE PLKCPRCDST  60
NTKFCYYNNY NKSQPRHFCK ACKRHWTKGG TLRNVPIGGG RKSKRLKTSD NAATSTAIAT  120
ASRVSTHVAV QSQQQRQILP FPLGDDQKNL SDVPLYQPLI HPPSNLLESK GMGTNNINVG  180
NPFISSSLGL PQIQIQKYQS LTIPNHASTS SFNPTPSTVS NSFQRSASVI NYAGEITMED  240
PTNVISTTST TATSMPITIA SSSAVTQPWQ QVASTSSGTN NMTTSYWNWD DIDTFVSTDL  300
NIPWDDSDIK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.22e-29Dof family protein