PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34470.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 271aa    MW: 31941.2 Da    PI: 9.7128
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.8e-1614104198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffk+ + +++ +++ l++pk+f++++g   e sk  tl d++gr  ev++  rk+++++++  GW +F k   + +g  vvFk++++s+f  +v +f+
  GAY34470.1  14 FFKIIL-PYSIEEKKLRIPKNFVKNFG--CELSKAATLIDPNGRISEVRI--RKNGKTIWFHHGWYDFIKYYSISAGYLVVFKYVKNSTF--HVLIFD 104
                 666664.56666667********8887..458999***************..*********************************99999..999997 PP
2B3322.1e-10182268697
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ++ +  +++r+++p kfa+e+    ++s+++ +  e+ +  +++     + g++v+t    +  k+++LkegD+++F+l+++++f l++ v+
  GAY34470.1 182 LQQSDINHHRVYVPVKFAKEFFCRDTKSIKILVSGENEKPHQINW---IQNGGFVFT--MVRIMKSKKLKEGDICIFELIRKNKFLLKLYVL 268
                 4667788899***********666778999999999999999998...444578999..99*******************999997777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAFNKRPQPN ASHFFKIILP YSIEEKKLRI PKNFVKNFGC ELSKAATLID PNGRISEVRI  60
RKNGKTIWFH HGWYDFIKYY SISAGYLVVF KYVKNSTFHV LIFDMTACEI NYPSKSEESK  120
NEEFVEKEEP YEDNECDLQD FLEEMGICIA RKHRIVTTEQ SKRAVKFVES LELKNPSFMV  180
ILQQSDINHH RVYVPVKFAK EFFCRDTKSI KILVSGENEK PHQINWIQNG GFVFTMVRIM  240
KSKKLKEGDI CIFELIRKNK FLLKLYVLKG K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-31B3 family protein