PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34491.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HSF
Protein Properties Length: 207aa    MW: 23950.2 Da    PI: 10.1238
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1063e-33321272103
                   HHHHHHHHHC...TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeile...deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                   Fl k+y++l+   d+ +k+++sw+++g+ fvv+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++         weF+h++F++g ++ll 
    GAY34491.1  32 FLCKTYDLLQerdDDGNKKIVSWNAQGDGFVVWSPAEFSELMLPKYFKHNNFSSFIRQLNTYGFKKTSPKQ---------WEFRHDKFRRGCRHLLV 119
                   99*******97777799**************************************************9988.........***************** PP

                   XXXXXXXX CS
  HSF_DNA-bind  96 kikrkkse 103
                   +i rkks+
    GAY34491.1 120 EIVRKKSD 127
                   *****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAKKFLELNN EGTSTNSSTS QSSPRTKNPA PFLCKTYDLL QERDDDGNKK IVSWNAQGDG  60
FVVWSPAEFS ELMLPKYFKH NNFSSFIRQL NTYGFKKTSP KQWEFRHDKF RRGCRHLLVE  120
IVRKKSDPSV FPAYLKAASN EGSIASAAGK QHNNHLLLME ENESLKRERL QLQMQIAEFK  180
ALEIKLLDSL SQYMGNFNHQ NKVRRLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-41HSF family protein