PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34579.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 241aa    MW: 26165.9 Da    PI: 9.0011
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-202575256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  GAY34579.1 25 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 75
                69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAPREKASGP VKVNGNSNGI VKEVHFRGVR KRPWGRYAAE IRDPGKKSRV WLGTFDTAEE  60
AARAYDAAAR EFRGAKAKTN FPLPSENVTN KISHNNININ NNNQSPSQSS TIESSSREPA  120
LMIDSSPLDL NLGPACAGGG AGGGFNATIR FPFQPVGGAF GAANQVFYFD PVAAMKSQQY  180
QRLRFDHHRN YNFHAAAVTA VGDGSVQSDS DSSSIVDLNH HDDKPRRVLD IDLNLPPEDF  240
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-29ERF family protein