PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34816.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HSF

Protein Properties

Length: 363aa MW: 41146.5 Da PI: 4.5557

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	84.7	1.3e-26	14	110	2	100
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT......XTTSEEEEESXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks......kekiweFkhksFkkgkke 92 Fl k+ye+++d+++++++sws++++sf+v+++ +fa+++LpkyFkh+nf+SF+RQLn+Y+ + ++ ++s++ + +kk+k+ GAY34816.1 14 FLAKTYEMVDDPSTNSTVSWSSSNKSFIVWNPPDFARDLLPKYFKHNNFSSFIRQLNTYNLHGQGTPLTESERqglkddI--------ERLKKEKEI 102 9************************************************************9888777663332332220........334444444 PP XXXXXXXX CS HSF_DNA-bind 93 llekikrk 100 ll +++r+ GAY34816.1 103 LLLELQRH 110 44444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDDGQGSSNS LPPFLAKTYE MVDDPSTNST VSWSSSNKSF IVWNPPDFAR DLLPKYFKHN 60 NFSSFIRQLN TYNLHGQGTP LTESERQGLK DDIERLKKEK EILLLELQRH EQERQGFESQ 120 MQLLRERFQL MEQRQQKMVS FVGRALQKPG LESNFGVHLE NHDRKRRLPR IDYFYDEANI 180 EDNPMGTSQI VGGADSADIS SSNMEKFEQL ESSMTFWENI VQDVGQSCFQ PNSSLELDES 240 TSCADSPAIS CIQLNVDARP KSPGIDMNSE PAVTAATEPV PSKEPETATT IPVQAGVNDV 300 FWEQFLTENP GSSDAQEVQS ERKECDGKKN ENKPADHGKF WWNMRNVNSL AEQMGHLTPA 360 ERT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDDGQGSSNS LPPFLAKTYE MVDDPSTNST VSWSSSNKSF IVWNPPDFAR DLLPKYFKHN  60
NFSSFIRQLN TYNLHGQGTP LTESERQGLK DDIERLKKEK EILLLELQRH EQERQGFESQ  120
MQLLRERFQL MEQRQQKMVS FVGRALQKPG LESNFGVHLE NHDRKRRLPR IDYFYDEANI  180
EDNPMGTSQI VGGADSADIS SSNMEKFEQL ESSMTFWENI VQDVGQSCFQ PNSSLELDES  240
TSCADSPAIS CIQLNVDARP KSPGIDMNSE PAVTAATEPV PSKEPETATT IPVQAGVNDV  300
FWEQFLTENP GSSDAQEVQS ERKECDGKKN ENKPADHGKF WWNMRNVNSL AEQMGHLTPA  360
ERT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	168	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-85	HSF family protein