PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY34845.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 187aa    MW: 21406.4 Da    PI: 9.9105
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY34845.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.7e-121868148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT eEde+l+  + + G +   +W+ ++r  g+ R++k+c +rw+++l
       GAY34845.1 18 RGFWTGEEDERLKSFILLNGEEggwNWEDVPRGAGLLRCGKSCHDRWFNHL 68
                     799*****************99*************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MEKMCPSCVS KDHHMIRRGF WTGEEDERLK SFILLNGEEG GWNWEDVPRG AGLLRCGKSC  60
HDRWFNHLNP NIRRGDFTLE EDELIINLCR AGSKWTNIGL LLPGRTHKDV MNYCKTSYMR  120
YKMSNRGVDP FANKRPRRKS STASSPASAS KKKNIIQEES TSKIPKNQLD GEKSGKLDLH  180
LSLKTPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135139RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.13e-33MYB family protein