PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35102.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 83aa    MW: 9677.06 Da    PI: 10.7945
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.93.5e-10236135
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaev 35
                krien+  r +tfskR+     KA+EL +L++ae+
  GAY35102.1  2 KRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI 36
                79*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MKRIENEDDR LITFSKRKSR TYNKASELVT LTGAEIGHPS IEAVANRFLG QTRRQMTTLL  60
LVEAQRQMTK GKETQRWRET PVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-11M-type_MADS family protein