PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35198.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 156aa    MW: 17333.4 Da    PI: 10.4103
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-0986118335
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgR 35 
                      +WT++E++l++ + ++ G+g+W++I+r + k+R
       GAY35198.1  86 PWTEDEHKLFLLGLQKVGKGDWRRISRNFVKTR 118
                      8**************************999777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MSGTGDSSAV NGGGGVILLF GIRVVVDSMR KSVSLNNLSQ YEQPQGYSSN RNNNKDDVAA  60
AGYASADDAV HNNSSRASRE QKRGVPWTED EHKLFLLGLQ KVGKGDWRRI SRNFVKTRDA  120
QPARENQSRD TAEKIHSPLI EILLLIRLQL LQWKKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-34MYB_related family protein