PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35284.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 370aa MW: 41555.8 Da PI: 6.6075

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	296	330	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+ +q+ +WF N+R ++ GAY35284.1 296 KWPYPSESQKLALAESTGLDSKQINNWFINQRKRH 330 569*****************************885 PP
2	ELK	37.4	5.3e-13	250	271	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlr Ysg+L+sLkqEF+ GAY35284.1 250 ELKGQLLRRYSGCLSSLKQEFM 271 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MDGGSNSTSC MNMMAFGDNS NGLYCPMMMM PLMSSFTHQH HRHDHHHDEH HQHHLDADSN 60 TLFLPLAAAA TTTINNIVPN QNRNSSSGSS LILEDNTTAT ATAINTINNS SARCYFMETN 120 YGSGASSSVK AKIMAHPHYH RLLAAYANCQ KVGAPPEVVA RLEEVCASAA SMGSGGSSCI 180 GQDPALDQFM EAYCEMLTKY EQELSKPFKE AMSFLQKIES QFKSLSISSP NSEDFDVNID 240 FIDPQAEDQE LKGQLLRRYS GCLSSLKQEF MKKRKKGKLP KEARQQLLDW WSKHYKWPYP 300 SESQKLALAE STGLDSKQIN NWFINQRKRH WKPSEDMQFM VMDATQPQYY IDSTVMGNPF 360 PMDLSPAPLL

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MDGGSNSTSC MNMMAFGDNS NGLYCPMMMM PLMSSFTHQH HRHDHHHDEH HQHHLDADSN  60
TLFLPLAAAA TTTINNIVPN QNRNSSSGSS LILEDNTTAT ATAINTINNS SARCYFMETN  120
YGSGASSSVK AKIMAHPHYH RLLAAYANCQ KVGAPPEVVA RLEEVCASAA SMGSGGSSCI  180
GQDPALDQFM EAYCEMLTKY EQELSKPFKE AMSFLQKIES QFKSLSISSP NSEDFDVNID  240
FIDPQAEDQE LKGQLLRRYS GCLSSLKQEF MKKRKKGKLP KEARQQLLDW WSKHYKWPYP  300
SESQKLALAE STGLDSKQIN NWFINQRKRH WKPSEDMQFM VMDATQPQYY IDSTVMGNPF  360
PMDLSPAPLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	275	LKQEFMKKRK
2	272	276	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-121	TALE family protein