PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35387.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 298aa MW: 33517.6 Da PI: 4.5684

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.2	1.7e-08	137	178	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k+ rr +NR AA rsR+RKk +++ Le k+ Le+e ++L GAY35387.1 137 SKKRRRQLRNRDAAVRSRERKKIYVKDLEMKSRYLESECRKL 178 6999**********************************8877 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MADDEFLEDE FDWNNLLTEL TDPSTAEIFS NPSPDGSVSP WIGDIESMLM NDNDDNSELK 60 PNQQSLDDFF ADVFVDQPSP ASGAEVIELP TDKDQSGADE SGNASPAEEK VLDEPEVNNS 120 DKNYNDTDND NADDPISKKR RRQLRNRDAA VRSRERKKIY VKDLEMKSRY LESECRKLGR 180 LLHCVLAENQ SLRFSLQKGN AYGASLTKQE SAVLLLESLL LGSLLWFLGI MCLFTLPKPI 240 WSHLESVPLV QVEEKAPGNL VQREAGSKNY LFTVVKSRRC KASRRKMKMT SHALSVLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	162	KKRRRQLRNRDAAVRSRERKKIYVK
2	139	163	KKRRRQLRNRDAAVRSRERKKIYVK
3	139	158	KRRRQLRNRDAAVRSRERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	1e-37	bZIP family protein