PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35418.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 242aa MW: 26908.9 Da PI: 6.9555

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177	1.8e-55	61	157	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+k+lP++akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre+ege+ GAY35418.1 61 VREQDRFMPIANVIRIMRKILPQHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREMEGER 157 69*********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
QAPGEMERTG GFRGYRQQLP NASRGPGLKF TETNIRLASA HEINQTNNNN HTNYEDNECT 60 VREQDRFMPI ANVIRIMRKI LPQHAKISDD AKETIQECVS EYISFITGEA NERCQREQRK 120 TITAEDVLWA MSKLGFDDYI EPLTVYLHRY REMEGERGSI RGEPPLVKRP PVEFRTLGVA 180 AFAAPAAAFH HMGLGRGHGF LGAATAPATG TYFNNNDPSN NNTAAGSSQP AVANGETYAH 240 NK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.1	1e-69	NF-YB family protein