PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35631.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 224aa    MW: 25764.4 Da    PI: 9.1449
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.33.4e-11148059128
         NAM  59 yfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +Fs +  k+ +g+r+ r + +g+W+     k v+s+ ++e++g kk + + k ++p+     W+mhey+l
  GAY35631.1  14 LYFSLK--KSVNGSRTDRRVGAGTWQGEEAGKVVVSRnSREKIGSKKRFRYEKDKSPH--DGCWIMHEYSL 80 
                 456665..456899************9999999988867788*********9777776..89*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MQFGGPNVED GEDLYFSLKK SVNGSRTDRR VGAGTWQGEE AGKVVVSRNS REKIGSKKRF  60
RYEKDKSPHD GCWIMHEYSL NPPLLPQNLE CSDLVPCQIR KNDEPGMENS RNRKLTNLLL  120
KKTLISLHLL SRVTDTRYQQ MPLTDQIPHH QLQLSVEEYQ STVQTPFILE EKQDIARIDN  180
VLPGTEQSIY DQLDKLLKIS SKCFRLHQTS KAINTRRPLM ILSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.18e-09NAC family protein