PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35659.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 223aa    MW: 25301 Da    PI: 9.2943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88e-133077655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                + +E++RRd++++ +++L++llP++   psk  ls  + + +A++YIk+L+
  GAY35659.1 30 KTIEKNRRDQMKNLYSTLKSLLPNQ---PSKEeLSLPDQVDEAINYIKMLE 77
                689*********************7...55555***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MGYLGQSLEA KGSMKRKQCS SSSPTKIERK TIEKNRRDQM KNLYSTLKSL LPNQPSKEEL  60
SLPDQVDEAI NYIKMLETKL KECKKKKESL QGRERSHACI SDGTEARLMT SSSPKAPEIE  120
IHEMGSNLEV ILTSGVDDQF IFYEVIRILH QDGAEILNAN FSVVGNTIFH VIHAEIRDSM  180
FGLGAAKISE RLKGFVSDRQ VKRDDKYARY LGTYFGIIRF GFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13339EKNRRDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-34bHLH family protein