PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35671.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HB-other

Protein Properties

Length: 620aa MW: 68224.6 Da PI: 5.6621

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.4	6.6e-10	375	412	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LAk++gL+++qV +WF N R + GAY35671.1 375 FEHflHPYPNDSEKIMLAKQTGLSKNQVANWFINARVR 412 664459******************************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MATYNPSLSY QRECFSTPVP GDNKFSNCLD PTSSHPDNVN MYVNPASSTE LYSEILSVGS 60 SLSPRNCVEF PSTGGTNGKM FIPSTSDAVV LPSIDGQLNA GTGNVIPTTQ PSVLDGEQNF 120 QCQGLSLSLS TQMASAVSVP SFQHQYSNPC FSSFLRTHLS VPGKGTMPCQ DNENETSKEL 180 RSSEGMLPGF QTESPFNTQC SIGHNEMHSG TYQYEPIGFN STILKSKHLK AAQQLLDEAV 240 NIQKALKLPN SNKNDAKETD GRSSSMLPAF HGILSNPTES VSNSSSELSH AERQELLNKK 300 TKLLSMLEEI QVTGRSLGEQ ETSSNGQASI PRLRFVDHQS RQQRALQQLG VMRHAWRPQR 360 GLPESSVSIL RAWLFEHFLH PYPNDSEKIM LAKQTGLSKN QVANWFINAR VRLWKPMIEE 420 MYKEEFGDTE ENSKSCLENA NKESSQNSSA PENRGEELQD SLSSKSGRSI HDVMSDYIPD 480 VEMNKPTASS LFQEGSHGDN VLNSGIMRLQ NDQRPNINDH RLYASIPHNQ NGNDVLMGAS 540 AATYGIQELR SYAISNQVSL ALGLRHQGTD VFPVSAGNNI GGDKIVVSSE GHDTADYHCM 600 DLGNQQDRFG NPQLLHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MATYNPSLSY QRECFSTPVP GDNKFSNCLD PTSSHPDNVN MYVNPASSTE LYSEILSVGS  60
SLSPRNCVEF PSTGGTNGKM FIPSTSDAVV LPSIDGQLNA GTGNVIPTTQ PSVLDGEQNF  120
QCQGLSLSLS TQMASAVSVP SFQHQYSNPC FSSFLRTHLS VPGKGTMPCQ DNENETSKEL  180
RSSEGMLPGF QTESPFNTQC SIGHNEMHSG TYQYEPIGFN STILKSKHLK AAQQLLDEAV  240
NIQKALKLPN SNKNDAKETD GRSSSMLPAF HGILSNPTES VSNSSSELSH AERQELLNKK  300
TKLLSMLEEI QVTGRSLGEQ ETSSNGQASI PRLRFVDHQS RQQRALQQLG VMRHAWRPQR  360
GLPESSVSIL RAWLFEHFLH PYPNDSEKIM LAKQTGLSKN QVANWFINAR VRLWKPMIEE  420
MYKEEFGDTE ENSKSCLENA NKESSQNSSA PENRGEELQD SLSSKSGRSI HDVMSDYIPD  480
VEMNKPTASS LFQEGSHGDN VLNSGIMRLQ NDQRPNINDH RLYASIPHNQ NGNDVLMGAS  540
AATYGIQELR SYAISNQVSL ALGLRHQGTD VFPVSAGNNI GGDKIVVSSE GHDTADYHCM  600
DLGNQQDRFG NPQLLHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75410.2	4e-81	TALE family protein