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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | GAY35721.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family | GRAS | ||||||||
| Protein Properties | Length: 430aa MW: 48492.9 Da PI: 6.4029 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 260.6 | 5.3e-80 | 55 | 426 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn....sseelaalkl...fsevsPil 91
lv+lLl Ae + s+++ +a+ +L ++ + +s +g+p+qRl++yf +AL++r + ++ ++ ++ +++e ++ ++a ++ ++ P++
GAY35721.1 55 LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGlKSEEVM--LllhpEEVMASAKQAliaCYQKVPFY 151
689**************************************************995555554441444433..1344433333333334458999**** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
+++ ++ qa+ e v++++++HiiD+ G + pa++qaLa+R++ pp l+iT v+ +++sk++ ee+++rLa+fAe++++pf fn+
GAY35721.1 152 QVTVFAGIQAVIENVSSAKTIHIIDLATRTGSHCPAIMQALATRQGCPPeLLKITMVVG-TTSSKQKFEEIENRLANFAETINLPFPFNI-----SFLT 244
*********************************************8888689****999.667**************************9.....2345 PP
GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
+++++++++gE++aV + ++l ++ +++ +le +L +++++P v+vv+e e++ n ++F +rf+ +l ++ alfd+le+ + r + +r++ E++
GAY35721.1 245 DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLET----FLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEM 339
67999********************99999998....************************************************************** PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ g++i+n++a eg+er+ h + Wr+ ++++G+ +++ls+ qa+l+lr ++ + +++ + ++l++gWk+ p +s+S+W+
GAY35721.1 340 YAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFAcGSSCTIDRNGECLIIGWKGIPHLSLSVWK 426
*********************************************************9999*************************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 430 aa Download sequence |
MAGLGELSLV DIIRAAITRY LQFSLHGRPD LFCLDHFCGN SPTGFPEGGI KGVELVHLLL 60 LSAEKIGSQQ FDRASIFLDH VDKYSSTTGN PVQRLVHYFS KALRERFNLE TGRITSKGLK 120 SEEVMLLLHP EEVMASAKQA LIACYQKVPF YQVTVFAGIQ AVIENVSSAK TIHIIDLATR 180 TGSHCPAIMQ ALATRQGCPP ELLKITMVVG TTSSKQKFEE IENRLANFAE TINLPFPFNI 240 SFLTDIKDFE TNEGEVVAVY SPVHLSHMIR KPNCLETFLT ELRKINPCVM VVIEVESNDN 300 LQTFEDRFFG TLFHFGALFD CLEVCMNRCH ANRMTFEEMY AGQHIRNIIA SEGEERIFGH 360 MKIDGWRDLF NRFGLVEAEL SSWSLFQAEL ILRSFACGSS CTIDRNGECL IIGWKGIPHL 420 SLSVWKFHRE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G03450.1 | 1e-51 | GRAS family protein | ||||




