PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35721.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 430aa    MW: 48492.9 Da    PI: 6.4029
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS260.65.3e-80554261374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn....sseelaalkl...fsevsPil 91 
                 lv+lLl  Ae + s+++ +a+ +L ++ + +s +g+p+qRl++yf +AL++r + ++ ++ ++  +++e         ++  ++a ++    ++  P++
  GAY35721.1  55 LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGlKSEEVM--LllhpEEVMASAKQAliaCYQKVPFY 151
                 689**************************************************995555554441444433..1344433333333334458999**** PP

        GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 +++ ++  qa+ e v++++++HiiD+    G + pa++qaLa+R++ pp  l+iT v+  +++sk++ ee+++rLa+fAe++++pf fn+         
  GAY35721.1 152 QVTVFAGIQAVIENVSSAKTIHIIDLATRTGSHCPAIMQALATRQGCPPeLLKITMVVG-TTSSKQKFEEIENRLANFAETINLPFPFNI-----SFLT 244
                 *********************************************8888689****999.667**************************9.....2345 PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                 +++++++++gE++aV + ++l ++ +++ +le     +L  +++++P v+vv+e e++ n ++F +rf+ +l ++ alfd+le+ + r + +r++ E++
  GAY35721.1 245 DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLET----FLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEM 339
                 67999********************99999998....************************************************************** PP

        GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + g++i+n++a eg+er+  h +   Wr+ ++++G+ +++ls+    qa+l+lr ++ +   +++ + ++l++gWk+ p +s+S+W+
  GAY35721.1 340 YAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFAcGSSCTIDRNGECLIIGWKGIPHLSLSVWK 426
                 *********************************************************9999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MAGLGELSLV DIIRAAITRY LQFSLHGRPD LFCLDHFCGN SPTGFPEGGI KGVELVHLLL  60
LSAEKIGSQQ FDRASIFLDH VDKYSSTTGN PVQRLVHYFS KALRERFNLE TGRITSKGLK  120
SEEVMLLLHP EEVMASAKQA LIACYQKVPF YQVTVFAGIQ AVIENVSSAK TIHIIDLATR  180
TGSHCPAIMQ ALATRQGCPP ELLKITMVVG TTSSKQKFEE IENRLANFAE TINLPFPFNI  240
SFLTDIKDFE TNEGEVVAVY SPVHLSHMIR KPNCLETFLT ELRKINPCVM VVIEVESNDN  300
LQTFEDRFFG TLFHFGALFD CLEVCMNRCH ANRMTFEEMY AGQHIRNIIA SEGEERIFGH  360
MKIDGWRDLF NRFGLVEAEL SSWSLFQAEL ILRSFACGSS CTIDRNGECL IIGWKGIPHL  420
SLSVWKFHRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-51GRAS family protein