PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35777.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ARR-B
Protein Properties Length: 281aa    MW: 31967.6 Da    PI: 6.0457
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.69.8e-07178199122
     G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                 kpr+ W+ eLH++Fv+av  LG
  GAY35777.1 178 KPRVFWSVELHQQFVSAVIWLG 199
                 79****************9995 PP
2Myb_DNA-binding33.31.1e-10181243248
                      SSS-HHHHHHHHHHHHHTTTT...............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...............tWktIartmg.kgRtlkqcksrwqkyl 48 
                        W+ e+++++v av  lG +                +k+I + m+  g+t++++ s++qky+
       GAY35777.1 181 VFWSVELHQQFVSAVIWLGIDifhtyafalmytteaVPKKILELMNvPGLTRENVASHLQKYR 243
                      67************************************************************7 PP
3G2-like49.21.1e-152142442555
     G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +A+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  GAY35777.1 214 TEAVPKKILELMNVPGLTRENVASHLQKYRL 244
                 57****************************8 PP
4Response_reg77.35.4e-26201281109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++l+++l+k  y ev+ +  +e al++l+ ++  +D+++ D+ mp+mdG++l ++   e  +lp+i+++a ++++ + + +  Ga 
    GAY35777.1  20 VLVVDDDPIWLRILEKMLRKCLY-EVTKCNRAEIALDMLRMSKngYDIVISDVHMPDMDGFKLHEQVGLEM-DLPVIMMSADDSKQVVMKGVTHGAC 114
                   89*********************.***************888888**********************6644.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel++
    GAY35777.1 115 DYLIKPVRIEELRN 128
                   ************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSPASSSVAV SDQFPAGLRV LVVDDDPIWL RILEKMLRKC LYEVTKCNRA EIALDMLRMS  60
KNGYDIVISD VHMPDMDGFK LHEQVGLEMD LPVIMMSADD SKQVVMKGVT HGACDYLIKP  120
VRIEELRNIW QHVAQQPKPF EESDDSYSVN QGNWRTSNRR KDEEEEAEKR DDTSTLKKPR  180
VFWSVELHQQ FVSAVIWLGI DIFHTYAFAL MYTTEAVPKK ILELMNVPGL TRENVASHLQ  240
KYRLYLIRLS GVSPHQDSSV GLYLRGLSGV SPHQDSSVGS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-105ARR-B family protein