PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35822.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 252aa    MW: 28244.9 Da    PI: 8.7488
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-2083131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp++     r++lg+f t  eAa+a+++a+k+++g
  GAY35822.1  83 VYRGIRQRP-WGKWAAEIRDPYK---GVRVWLGTFNT-AEAARAYDEAAKRIRG 131
                 69*******.**********865...4**********.*************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MCGGALIADY DEVRPVRRER KLTSEDLWSE FGSISDLLGL DYNGKSHPKQ PLKVKNEKAE  60
DLSNKAARVE GKEKKTQRVR KNVYRGIRQR PWGKWAAEIR DPYKGVRVWL GTFNTAEAAR  120
AYDEAAKRIR GDKAKLNFAQ PPPPIAPPPA KKRCMPSPEL TQPRFETIGT PPAPAPSPWV  180
GFGYQNEFYQ PRAVDDEFEL SQQISSLESF LGLEPLMSQP SGNGAGGYDS VDFWMLDDVA  240
GTQQLNSNQF LC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-51ERF family protein